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Shotgun Antisense
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Shotgun Antisense

 

 
Identify an interesting mutant in the morning, start sequencing the gene's DNA in the afternoon

Dictyostelium plasmid or integrating vector



 


We developed a technique for mutagenesis of Dictyostelium based on the observation that antisense works well in this system to repress expression of selected gene products.

The cDNA library can be made from any selected developmental stage of cell-type, and the promoter can also be developmental-stage or cell-type specific.

For instance, for one project we were interested in finding genes expressed in vegetative growth that affect cell-type choice during late development, so we used a vegetative promoter and a vegetative cDNA library.

After identifying an interesting mutation, PCR is used to immediately obtain the antisense cDNA, which is then sequenced.

 

Mutagenesis and gene identification in Dictyostelium by shotgun antisense.  Spann TP, Brock DA, Lindsey DF, Wood SA, Gomer RH.  Proc Natl Acad Sci U S A 1996 93:5003-7

Gene identification by shotgun antisense.  Gomer RH.  Methods 1999 18:311-5

 

 

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Last modified: October 03, 2003